YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114555597
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTANKAHTG QGSCWVATLA SAMIPPADSL LKYDTPVLVS RNTEKRSPKA RLLKVSPQQP  60
   61 GPSGSAPQPP KTKLPSTPCV PDPTKQAEEI LNAILPPREW VEDTQLWIQQ VSSTPSTRMD 120
  121 VVHLQEQLDL KLQQRQARET GICPVRRELY SQCFDELIRE VTINCAERGL LLLRVRDEIR 180
  181 MTIAAYQTLY ESSVAFGMRK ALQAEQGKSD MERKIAELET EKRDLERQVN EQKAKCEATE 240
  241 KRESERRQVE EKKHNEEIQF LKRTNQQLKV INAQAGVEVP PALRPSPTGQ AFGSFSMAFK 300
  301 CLSTCTAKG

Type	Start	End	Confidence
Signal Peptide	1	29	0.83
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	309	0.99