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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114554617
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDLSCLGLG LCEQNLGYIL RDGLGPRGFL QLLESGEASG AQDGPETLMD STTATAELGW  60
   61 MVHPPSGWEE VSGYDENMNT IRTYQVCNVF ESSQNNWLRT KFIRRRGAHR IHVEMKFSVR 120
  121 DCSSIPSVPG SCKETFNLYY YEADFDSATK TFPNWMENPW VKVDTIAADE SFSQVDLGGR 180
  181 VMKINTEVRS FGPVSRSGFY LAFQDYGGCM SLIAVRVFYR KCPRIIQNGA IFQETLSGAE 240
  241 STSLVAARGS CIANAEEVDV PIKLYCNGDG EWLVPIGRCM CKAGFEAVEN GTVCRGCPSG 300
  301 TFKANQGDEA CTHCPINSRT TSEGATNCVC RNGYYRADLD PLDMPCTTIP SAPQAVISSV 360
  361 NETSLMLEWT PPRDSGGRED LVYNIICKSC GSGRGACTRC GDNVQYAPRQ LGLTEPRIYI 420
  421 SDLLAHTQYT FEIQAVNGVT DQSPFSPQFA SVNITTNQAA PSAVSIMHQV SRTVDSITLS 480
  481 WSQPDQPNGV ILDYELQYYE KELSEYNATA IKSPTNTVTV QGLKAGAIYV FQVRARTVAG 540
  541 YGRYSGKMYF QTMTEAEYQT SIQEKLPLII GSSAAGLVFL IAVVVIAIVC NRRRGFERAD 600
  601 SEYTDKLQHY TSGHMTPGMK IYIDPFTYED PNEAVREFAK EIDISCVKIE QVIGAGEFGE 660
  661 VCSGHLKLPG KREIFVAIKT LKSGYTEKQR RDFLSEASIM GQFDHPNVIH LEGVVTKSTP 720
  721 VMIITEFMEN GSLDSFLRQN DGQFTVIQLV GMLRGIAAGM KYLADMNYVH RDLAARNILV 780
  781 NSNLVCKVSD FGLSRFLEDD TSDPTYTSAL GGKIPIRWTA PEAIQYRKFT SASDVWSYGI 840
  841 VMWEVMSYGE RPYWDMTNQD VINAIEQDYR LPPPMDCPSA LHQLMLDCWQ KDRNHRPKFG 900
  901 QIVNTLDKMI RNPNSLKAMA PLSSGINLPL LDRTIPDYTS FNTVDEWLEA IKMGQYKESF 960
  961 ANAGFTSFDV VSQMMMEDIL RVGVTLAGHQ KKILNSIQVM RAQMNQIQSV EV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle