YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221134870
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENRHVKLL ILGSGPAGYS AAVYAARANL NPVLLTGIQQ GGQLTTTTEV ENWPGDPEGL  60
   61 TGPDLMVRMQ QHAEKFDTEI IFDHINKTDL SKRPFTLTGD NGTYTCDALI ICTGASAKYL 120
  121 GLESETAFQG KGVSACATCD GFFYRNQKVA VVGGGNTAVE EALYLSNIAS EVHVIHRRDS 180
  181 FRSEKILSDR LLEKAKNGNV VLHFNRTLDE VLGDEMGVTH IRVADTQSDA KEDIEVMGLF 240
  241 IAIGHKPNTD IFEGELEMKD GYIKVQSGTE GNATQTSVEG VFAAGDVSDH IYRQAITSAG 300
  301 TGCMAALDAE KYLDSQE

Type	Start	End	Confidence
Signal Peptide	1	25	0.91
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	317	0.99