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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114772337
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNTKTIIA VIIGAALGAG ALSLYQGAGS NSDTVEATSA EKQPLYWVAP MDSNYRRDKP  60
   61 GKSPMGMDLI PVYEEGSSGD DFGPGAVKIA PHVVNNLGVR TAPVELKNMH TEISTVGYVQ 120
  121 YDEDKLIHIH PRVDGWIEKL YIKAAGNPVE KGQPLYRLYS PQLVNAQEEL LIALNRDNSS 180
  181 LISAAKDRLK ALQLSSDFIQ KLEKTRKVQQ TITFYSPQAG FVDGLKVREG FYVKPGNTLL 240
  241 SIGQLDQVWV EAEVFERDAA LIKKGLPVSM TLDYLPGEDW AGVVDYVYPT LNSKTRTLRV 300
  301 RLKFDNTDYQ LKPNMFAQVS IHANQADSTI LVPKEAVIRT GKQDRVVLAL GDGQFKSIEV 360
  361 TIGRVDIDNI EILDGLNEDD VVVTSAQFLI DSESSKSSDF KRMTHDEVPN SVWMQGDVNS 420
  421 VMAGHRMVNI SHGPAEAWDW PEMVMDFTVA EKVDIDSLKS GQSLHFEVSK TEGGGYEITG 480
  481 IHIMSESGDM SEEVSFATVS GLINSINVDT RVLNISRGPI DKWDRPAATM DFIVADNIEI 540
  541 VDFTVGDNVI FTFEVRDDLV ITDISLESDE QHGEENKPVV DHSNH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle