YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119600427, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSALPGWGP AHLQRPLLGP ASCLGILRPA MTAHSFALPV IIFTTFWGLV GIAGPWFVPK  60
   61 GPNRGVIITM LVATAVCCYL FWLIAILAQL NPLFGPQLKN ETIWCPALGM TVAPLSLTTP 120
  121 SSGPSPTQLC LVTSSLLLAP RDPDPQGLPG SWKSSQSSQP ARALGSPGHS SGRGDVLLQY 180
  181 PHCSGVCPLS QGDAAGELVW VGSFPLQTGQ MPGLSPS

Type	Start	End	Confidence
Cytoplasmic	1	35	0.54
Transmembrane Helix	36	58	0.89
Non-Cytoplasmic	59	65	0.50
Transmembrane Helix	66	88	0.92
Cytoplasmic	89	101	0.51
Transmembrane Helix	102	118	0.40
Non-Cytoplasmic	119	217	0.66