YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114773698, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEQVTTSNE DKATRLRGWA HISQTGLRFV WIALIGFILD QVTKYAVMDS FTLYESVQVL  60
   61 PFFNLTYVHN YGAAFSFLSD AGGWQRYFFT AIAAIVSCVI VWWLYQSPRS QRLLPIAFAF 120
  121 ILGGAIGNLY DRLVHGYVVD FLHFYYESFH YPAFNIADSV IFIGAGLLIL DMFINKDEDQ 180
  181 PKESSHE

Type	Start	End	Confidence
Cytoplasmic	1	24	0.85
Transmembrane Helix	25	43	0.87
Non-Cytoplasmic	44	84	0.89
Transmembrane Helix	85	105	0.94
Cytoplasmic	106	112	0.90
Transmembrane Helix	113	134	0.89
Non-Cytoplasmic	135	152	0.89
Transmembrane Helix	153	174	0.90
Cytoplasmic	175	187	0.97