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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114545086, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLALLARN RLALAGLIVM GLVVLLALVT PLLPLPDPDV TDTGNRFLPP FSEGALLGTD  60
   61 HLGRDQLSRL LWGTRLSLAV GFAAATIAAV LGAAVGIIAG YYGGRVDNLI MRGVDMLMAF 120
  121 PYILLALAIV AALGPGLLNA LIAVAAVNIP FFARNIRGIT VGIANREFID AARLAGMNDA 180
  181 RIILSEVLPN VIPVIVIAMS TTVGWMILET AGLSFLGLGS QPPQADLGSM LGEARAALIT 240
  241 SPHTSVVPGA MILIIVMAIN LLGDGVRDAL DPRLRSGALT RPMAATLVRR EDPAPEPQGD 300
  301 DVLSLCDLQT QFHVKHRVYR AVGGVSLGVK PGECLGIIGE SGSGKSVTAL SVMGLVASPP 360
  361 GVITGGAVHY KGEDLVGAPY GRLRDLRGRE VAYIFQDPLA TLHPLYKVGD QLVEAIRVHH 420
  421 ALSDSEARAR ALGLLRDVRI PNAESRLDSF PHELSGGMRQ RVGIAMALAN DPEVIIADEP 480
  481 TTALDVTVQA QILSLLDTLR REKGLAIVFI THDFGVVAQL CDRVAVMYAG RIVEEGPTRA 540
  541 LLEAPAHPYT RRLIACVPEL GEGKRRLHAI PGLPPAVNDL PSGCAFAPRC DKAQPACRQG 600
  601 EIALDAYGPR RLRCLYPETE LEGTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle