YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114541406, gi...
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPTRNLLIL LAAAGSVAVL LGALGFQYLG DLPPCKLCIY QRWPHVAAVV IALGALATRG  60
   61 PALPSLGALA ALSTAGIGFY HTGVERGWWE GPTSCTASGS VTGISADDLL NQIMSAEIQR 120
  121 CDDVLWDLFG LSMASWNTIA SLVFMALWIW AALKSKA

Type	Start	End	Confidence
Cytoplasmic	1	6	0.79
Transmembrane Helix	7	29	0.86
Non-Cytoplasmic	30	38	0.80
Transmembrane Helix	39	58	0.79
Cytoplasmic	59	64	0.59
Transmembrane Helix	65	84	0.84
Non-Cytoplasmic	85	132	0.89
Transmembrane Helix	133	152	0.94
Cytoplasmic	153	157	0.84