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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3043718, gi|7...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSLAFCQPLS LSLSPLLPLA SSLAPERTHL PGPGSLLLSP PSFPARPREP RGCVTAAPPD  60
   61 KMDTAEEDIC RVCRSEGTPE KPLYHPCVCT GSIKFIHQEC LVQWLKHSRK EYCELCKHRF 120
  121 AFTPIYSPDM PSRLPIQDIF AGLVTSIGTA IRYWFHYTLV AFAWLGVVPL TACRIYKCLF 180
  181 TGSVSSLLTL PLDMLSTENL LADCLQGCFV VTCTLCAFIS LVWLREQIVH GGAPIWLEHA 240
  241 APPFNAAGHH QNEAPAGGNG AENVAADQPA NPPAENAVVG ENPDAQDDQA EEEEEDNEEE 300
  301 DDAGVEDAAD ANNGAQDDMN WNALEWDRAA EELTWERMLG LDGSLVFLEH VFWVVSLNTL 360
  361 FILVFAFCPY HIGHFSLVGL GFEEHVQASH FEGLITTIVG YILLAITLII CHGLATLVKF 420
  421 HRSRRLLGVC YIVVKVSLLV VVEIGVFPLI CGWWLDICSL EMFDATLKDR ELSFQSAPGT 480
  481 TMFLHWLVGM VYVFYFASFI LLLREVLRPG VLWFLRNLND PDFNPVQEMI HLPIYRHLRR 540
  541 FILSVIVFGS IVLLMLWLPI RIIKSVLPNF LPYNVMLYSD APVSELSLEL LLLQVVLPAL 600
  601 LEQGHTRQWL KGLVRAWTVT AGYLLDLHSY LLGDQEENEN SANQQVNNNQ HARNNNAIPV 660
  661 VGEGLHAAHQ AILQQGGPVG FQPYRRPLNF PLRIFLLIVF MCITLLIASL ICLTLPVFAG 720
  721 RWLMSFWTGT AKIHELYTAA CGLYVCWLTI RAVTVMVAWM PQGRRVIFQK VKEWSLMIMK 780
  781 TLIVAVLLAG VVPLLLGLLF ELVIVAPLRV PLDQTPLFYP WQDWALGVLH AKIIAAITLM 840
  841 GPQWWLKTVI EQVYANGIRN IDLHYIVRKL AAPVISVLLL SLCVPYVIAS GVVPLLGVTA 900
  901 EMQNLVHRRI YPFLLMVVVL MAILSFQVRQ FKRLYEHIKN DKYLVGQRLV NYERKSGKQG 960
  961 SSPPPPQSSQ E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle