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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114765427, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDQNKNLLI ATGLSFVVIL VWFLLFPPPE EQLQDQAGPN AVETVEGDTA TTPSAAPSAT  60
   61 TGGGDTAAAP AQAETVDAPR VAIDTDRLGG SISLTGGRID ELILKDYTVT LDEDSPNVQI 120
  121 LEPVGGGNPY YALYGWAPGS GLGLDDVPGA NTAWELESGD SLSVDSPVTL RWDSPAGLVF 180
  181 RRTISIDEDF MFSVTQSVEN AGEGTVSAAP YGIIARHGEP ADLKNFFVLH EGVVAIADGK 240
  241 LSEIGYSDMP DMDVNQSEGA RAEVTQVTEN GWIGFTDHYW MTTLIPQQGA PFKQAAKYDE 300
  301 RRDIYQTEAV LPTMTLAPGE TQEVTTQLFA GAKEYETIRD YEDAGVVRFI DSIDWGWFFF 360
  361 LTKPIFWMLH QIHLLIGNMG WSIIGLTLII KAILFPLAYK SYVSMAKMKE LQPEMEKLKE 420
  421 KAGDDRQKLQ QEMMALYKKE KVNPASGCLP ILLQIPIFFS LYKVIFVAFE LRHAPWFGPF 480
  481 QDLSTPDPTS LFNLFGLLPW AAPAPGTTLA LVFIGILPLL LGISMWLQQK LNPAPADPTQ 540
  541 KMIFAWMPWV FMFMLGGFAS GLVVYWITNN TITFTQQYLI MRSQGYKPDV FGNIVSGFKR 600
  601 KPKADGDAKG K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle