YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114767063, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFALTVTC PSTRGIVAAI AAFLAEQGCN ITDSSQFDDF ETGNFFMRVS VMSEKDATLE  60
   61 ELRERFAETA KNFKMDYEFH DEAEKMKVII MVSRFGHCLN DLLYRWRIGA LPIDIVAVIS 120
  121 NHMDYQKVVV NHDIPFHCIR VTKENKPQAE ARIMEVVEET GAELVVLARY MQILSDDLCR 180
  181 VMSGRIINIH HSFLPSFKGA NPYKQAFERG VKLIGATSHY VTADLDEGPI IEQDTVRVTH 240
  241 AQSPEDYVSL GRDVEAQVLA RAIHAHIHRR VFLNGNKTVV FPASPGSYAS ERMG

Type	Start	End	Confidence
Signal Peptide	1	21	0.88
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	294	0.99