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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114541944, gi...
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.27
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNARNIAFW VVLFLLILAL FNLFSGGGST LQSREISYSD FVSAVEDNSV SSVTIDGEQI  60
   61 RYRSSDGTDY VTVKPQDAQV TDLLIDNGVT VRAEQQEQSG FQAFLLSLLP FLLLIGVWIY 120
  121 FMNRMQGGGK GGAMGFGKSK AKLLTEKHGR VTFDDVAGID EAKEELEEIV EFLRNPQKFS 180
  181 RLGGKIPKGA LLVGPPGTGK TLLARAIAGE AGVPFFTISG SDFVEMFVGV GASRVRDMFE 240
  241 QAKKNAPCIV FIDEIDAVGR NRGSGYGGGN DEREQTLNQL LVEMDGFEAN EGVIIIAATN 300
  301 RRDVLDPALL RPGRFDRQVM VGNPDIKGRE KILGVHARKT PLGPDVDLRI IARGTPGFSG 360
  361 ADLANLVNEA ALMAARVGRR FVTMEDFENA KDKVMMGAER RSMVLTADQK EKTAYHEAGH 420
  421 AVVGLALPQC DPVYKATIIP RGGALGMVVS LPEIDRLNWH KSECEEKLAM TMAGKAAEII 480
  481 KYGEPNVSNG PAGDIQQASA LARAMVLRWG MSDKIGNIDY SEAHEGYQGN TAGLSVSAHT 540
  541 KELIEDEVRR FIQDAYERAY QILSDRKEDW ERLAQGLLEY ETLTGEEIKR VMNGEPPHSG 600
  601 DGADNSDDDT PSVTAIPKTK PKPKPAGEGG MEPEPTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle