YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114705419, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIALCFVVA ALFAVTVYLI LSKHIIRMLL GVVLLGNSVN LLIFTNGRIQ SIVPPIIPEG  60
   61 LEVPGEMIAN PLPQALILTA IVISFSFFAF LLVLSYRAFQ DLDTDDTDEM RIAEPEDEGL 120
  121 PPLGY

Type	Start	End	Confidence
Non-Cytoplasmic	1	3	0.48
Transmembrane Helix	4	22	0.74
Cytoplasmic	23	27	0.48
Transmembrane Helix	28	47	0.64
Non-Cytoplasmic	48	73	0.79
Transmembrane Helix	74	94	0.93
Cytoplasmic	95	125	0.86