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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114706805, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQNFRNFAL WAIIALLLIA LFQLFSNGSQ TANAREIPYS QFLSDVDSGR VTSVTIQGQK  60
   61 ITGSYNDGSQ NFQTYAPDDA NLVERLESGQ VRISAAPPGD DTNPIWSMLL SFGPILLILA 120
  121 VWIFLMRQMQ GGAGGKAMGF GKSKAKLLTE AHGRVTFADV AGVDEAKADL EEIVEFLREP 180
  181 QKFQRLGGKI PRGVLLVGPP GTGKTLTARA VAGEAGVPFF TISGSDFVEM FVGVGASRVR 240
  241 DMFEQAKKNS PCIIFIDEID AVGRHRGAGL GGGNDEREQT LNQLLVEMDG FESNEGIILI 300
  301 AATNRPDVLD PALLRPGRFD RQVVVPNPDV TGREKILKVH TRNTPLAPNV DLRTIARGTP 360
  361 GFSGADLANL VNEAALMAAR RSKRLVTMLE LEDAKDKVMM GAERRSMAMT EDEKKLTAYH 420
  421 EAGHALVGIH VPGNDPLHKV TIIPRGRALG VTMNLPERDR YGMRKNEMEA RLAMIFGGRA 480
  481 AEEIIYGAEN VTTGASNDIQ QATNMARAMV MEYGMSDKLG RLRYKQNQDE VFLGHSVAQQ 540
  541 QNMSEDTARL IDSEVRGIVE VAENKARQIL NDNIEQLHLL AKALLEYETL SGKEVDDLLN 600
  601 GRPLTRDMGD DTPPSRGSSI PKAGTSRPSH GGETGEGGME PQPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle