YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114705637, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTTYSLPN LLTYARIVCV PLVVVCFFVE GSLKSPDYAR WTALAIFIAA SITDYFDGYL  60
   61 ARAWKQTSTI GRMLDPIADK LLVAAVLLLL AADGTIAGWS LWAAIVILCR EILVSGLREY 120
  121 LAELKVSVPV TRLAKWKTTF QMVSIGILLA GPAGDKLIPN VTEIGIVCLW IAAVITLITG 180
  181 YDYFRAGLRH IED

Type	Start	End	Confidence
Cytoplasmic	1	11	0.68
Transmembrane Helix	12	33	0.88
Non-Cytoplasmic	34	38	0.63
Transmembrane Helix	39	60	0.84
Cytoplasmic	61	76	0.60
Transmembrane Helix	77	97	0.75
Non-Cytoplasmic	98	98	0.32
Transmembrane Helix	99	114	0.64
Cytoplasmic	115	132	0.60
Transmembrane Helix	133	154	0.63
Non-Cytoplasmic	155	160	0.75
Transmembrane Helix	161	184	0.84
Cytoplasmic	185	193	0.88