YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114537537, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCRLSGTLSA ACNDQDQQNG IHMDAFVSEM MNTLGPFGIA LLMFLENIFP PIPSELIMPL  60
   61 AGYEAATGSM SIATVIISGT IGSLLGIIPW YYVGEWMGLR RTKRFAAKHG RWITMGPQDV 120
  121 DKANDWFNRH GPEAVLFGRL VPTVRTLISV PAGIAHMSLW KFLIYSAMGS AVWTSLLAFA 180
  181 GYFLRSQYEA VENYVGPVSN AVLVIILIVY LYRVWTFDSE SENTAGGS

Type	Start	End	Confidence
Cytoplasmic	1	30	0.91
Transmembrane Helix	31	50	0.87
Non-Cytoplasmic	51	69	0.82
Transmembrane Helix	70	94	0.91
Cytoplasmic	95	161	0.77
Transmembrane Helix	162	184	0.91
Non-Cytoplasmic	185	193	0.44
Transmembrane Helix	194	215	0.89
Cytoplasmic	216	228	0.48