YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114425680
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQVTRASSG QSQALLSCLI IAVCAALIIQ AGQIQGAKAQ PGREPGEVNS RQPGNGAYEI  60
   61 STTDTERRLR KVIWKCVSTG NGTTGHRVPR SVFHVRWNPN EKFIVESREN PAINSSKLAP 120
  121 HPRLKVSKNT KLTLSPKLYL CHDKHSELCH NKTQQFRQRI VRAFEKAMVE SVNESQANHY 180
  181 NVDYKPVFGD SFEEQYYPST CLVMEAGVRV LRRKDAPFNK LPFGRLFPRQ KLFRNVKDIK 240
  241 TCAIVSSAGS LAGSKLGRFI DTHDIVMRFN HAPTQGHEVD VGSKTTIRVV NSQVVTKPEF 300
  301 DFTRAPIFRN VTIAAWDPGK YNGTLEDWLT SADYDLFTNY ELYRRRYPKS RAFLIDPHSV 360
  361 WRLWQSLQMF AGNRPISRNP PSSGFIGLAL LLPHCPQVDF VEYVPSTRLN GRCHYYSKEM 420
  421 NSACTFGSWH PLAAEKLMAL DMNMAEDDDM SVFQFGILRI RRPDKLLCGF NFFGY

Type	Start	End	Confidence
Signal Peptide	1	36	0.93
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	475	0.99