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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lin-3
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKMLLFCIL LLFMPQFTES CLPSWFRQER SAPEQLQSAE NAAENSGSVP PDTSRNSLET  60
   61 NEIGDAPSST STPETPTETT ISEAGDDEKR TEEVAKELIE KEAEYEGEYE DEKVDEEVEE 120
  121 ALKYNEDATQ DATSTLKPAV RKEIEKLKEA KCKDYCHHNA TCHVEVIFRE DRVSAVVPSC 180
  181 HCPQGWEGTR CDRHYVQAFY APINGRYNGK TKKPLIFMVH HPNQTISTTP SSQDSEISSI 240
  241 FSGLYERIVQ SSTSAIPAFA FLIVMLIMFI TIVVYAYRRM SKRSDDMTYT MSHMCPPEAF 300
  301 NVLKTPNGRH IPVHQIPSCS YTIPTPGTVP PNISSTPGSR IPTRQQAIRN NEQARNNFFS 360
  361 ILRSQGTIPS RSINDDDTPK HYKSVPRVEV SAINYSGHID FSTVSYQSTE SEVSKASVTC 420
  421 PPPAHTVINI ELDSADTNFR SPSRSSGEQG SPATCEPMIR HT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle