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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114315948, gi...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.20
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGNFGRNLA LWVVIALLLV VLFNQFQPGG GKPPEAQIAY SDFIGEVNGG RVRSVTIQGH  60
   61 NVSGSMTDGK AFQTYTPDDQ SLVQHLTDKG IRVVAKPEDG DVSPFLHYLL SWFPFLLLIG 120
  121 VWVFFMRQMQ SGGGRAMGFG KSRARMLTEK QGRVTFEDVA GIDEAKGELQ EIVEFLKDPQ 180
  181 KFQRLGGKIP KGVLLVGPPG TGKTLLARAI AGEANVPFFT ISGSDFVEMF VGVGASRVRD 240
  241 MFEQGKKNAP CIIFIDEIDA VGRHRGAGLG GGNDEREQTL NQMLVEMDGF ESNEGVILIA 300
  301 ATNRPDVLDP ALLRPGRFDR QVVVPNPDVA GREKILRVHM RKVPLASDVD PKVIARGTPG 360
  361 FSGADLANLV NEAALLAARL SRRTVSMAEF EDAKDKVMMG AERRSMVMSD AEKRMTAYHE 420
  421 AGHALCGIYE PDSDPLHKVT IIPRGRALGL TMNLPEGDRL SYSKSYLLAK LVLTMGGRVA 480
  481 EELIFGPNQV SNGASGDIKQ ATDISRRMIT EWGMSDKLGM IAYGDNSQEV FLGHSVTQSK 540
  541 NISEHTAREI EAEVKQMIDR AYARAREILT QHIDELHLLA QGLLEYETLS GEESRMVMRG 600
  601 EKIEKKVVDE PMPETRRSSV PTTSRPATPP PGEGFGAATQ PG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle