YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114316918, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDPAIRHAI LIPADQGCPD HFSASFALTA LRRTSMKEAR WFCEIKVRRG RPLTMTDTHE  60
   61 ALAVGRTSDG RLIHRPLSPH LQVYRWPITM ALSILHRVTG VAAAIGTLLL TWWLVAAATS 120
  121 DHAYDIVSGF MRSGFGLLLL FGWTVALVYH FINGIRHLVW DAGYGFDKHE ANRSSYIVLG 180
  181 LTALFTVAIW IAAAVVL

Type	Start	End	Confidence
Cytoplasmic	1	93	0.98
Transmembrane Helix	94	116	0.92
Non-Cytoplasmic	117	133	0.85
Transmembrane Helix	134	153	0.93
Cytoplasmic	154	173	0.90
Transmembrane Helix	174	194	0.95
Non-Cytoplasmic	195	197	0.74