YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114316131, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAAIAFYVF SAILIVSGAM VVSARNPVHA VLFLILAFFN AAGLFLLTGA EFLAMILVIV  60
   61 YVGAVAVLFL FVVMMLNINF AEVRDGWQRY APVGAAIGGV LLVELAMVLG GWQVAPGASA 120
  121 LRFSPRPDHV QNTVALGQIV YTHYVMLFQM AGLILLVAMI GAIVLTLRDR KTSRHQNIAE 180
  181 QVNRRIEDTL QLVNAPVGQG IHPEDFLRPL PPALSKPAPN HGQIGQDDHG ASTHLPQNAH 240
  241 HAAEDRV

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.82
Transmembrane Helix	5	24	0.89
Cytoplasmic	25	29	0.81
Transmembrane Helix	30	50	0.89
Non-Cytoplasmic	51	56	0.67
Transmembrane Helix	57	78	0.92
Cytoplasmic	79	89	0.83
Transmembrane Helix	90	112	0.89
Non-Cytoplasmic	113	144	0.92
Transmembrane Helix	145	167	0.92
Cytoplasmic	168	247	0.99