YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114327483, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVTTFGAMM TTLPASQPDQ TTPAETGAAT PTGYDVLARI CADTRKEVAQ RKALLSKETL  60
   61 INRIRDLPAP RGFGQALKDA VLQGGYGLIT EIKKASPSGG LIRPNFNPAE LAKAYQVGGA 120
  121 TCLSVLTDGP YFQGDPDHLV AARAAVSLPV LRKDFILDPW QIYESRAMGA DCILLIMAAL 180
  181 TDDEARELEE TARHLDLDVL AEVHDEAELD RALALQTGLI GINNRNLKTL KTDLSTTLNI 240
  241 APLLPPDRFL VAESGIRTHE DIQRLAATGV RSFLVGESLM RQQDVTKAVR ELIGIDASSS 300
  301 VPPIA

Type	Start	End	Confidence
Signal Peptide	1	18	0.65
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	305	0.99