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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6330833
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LESVSGGEGC VAEPGSPGAP RSRPRCHPAG GRCCLAQALS DQTMETLLGG LLAFGMAFAV  60
   61 VDACPKYCVC QNLSESLGTL CPSKGLLFVP PDIDRRTVEL RLGGNFIIHI SRQDFANMTG 120
  121 LVDLTLSRNT ISHIQPFSFL DLESLRSLHL DSNRLPSLGE DTLRGLVNLQ HLIVNNNQLG 180
  181 GIADEAFEDF LLTLEDLDLS YNNLHGLPWD SVRRMVNLHQ LSLDHNLLDH IAEGTFADLQ 240
  241 KLARLDLTSN RLQKLPPDPI FARSQASALT ATPFAPPLSF SFGGNPLHCN CELLWLRRLE 300
  301 RDDDLETCGS PGGLKGRYFW HVREEEFVCE PPLITQHTHK LLVLEGQAAT LKCKAIGDPS 360
  361 PLIHWVAPDD RLVGNSSRTA VYDNGTLDIF ITTSQDSGAF TCIAANAAGE ATAMVEVSIV 420
  421 QLPHLSNSTS RTAPPKSRLS DITGSSKTSR GGGGSGGGEP PKSPPERAVL VSEVTTTSAL 480
  481 VKWSVSKSAP RVKMYQLQYN CSDDEVLIYR MIPASNKAFV VNNLVSGTGY DLCVLAMWDD 540
  541 TATTLTATNI VGCAQFFTKA DYPQCQSMHS QILGGTMILV IGGIIVATLL VFIVILMVRY 600
  601 KVCNHEAPSK MAAAVSNVYS QTNGAQPPPP SSAPAGAPPQ GPPKVVVRNE LLDFTASLAR 660
  661 ASDSSSSSSL GSGEAAGLGR APWRIPPSAP RPKPSLDRLM GAFASLDLKS QRKEELLDSR 720
  721 TPAGRGAGTS ARGHHSDREP LLGPPAARAR SLLPLPLEGK AKRSHSFDMG DFAAAAAGGV 780
  781 VPGGYSPPRK VSNIWTKRSL SVNGMLLPFE ESDLVGARGT FGSSEWVMES TV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle