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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14133247
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQLSVKMSVL ISQSVINYVE EENIPALKAL LEKCKDVDER NECGQTPLMI AAEQGNLEIV  60
   61 KELIKNGANC NLEDLDNWTA LISASKEGHV HIVEELLKCG VNLEHRDMGG WTALMWACYK 120
  121 GRTDVVELLL SHGANPSVTG LYSVYPIIWA AGRGHADIVH LLLQNGAKVN CSDKYGTTPL 180
  181 VWAARKGHLE CVKHLLAMGA DVDQEGANSM TALIVAVKGG YTQSVKEILK RNPNVNLTDK 240
  241 DGNTALMIAS KEGHTEIVQD LLDAGTYVNI PDRSGDTVLI GAVRGGHVEI VRALLQKYAD 300
  301 IDIRGQDNKT ALYWAVEKGN ATMVRDILQC NPDTEICTKD GETPLIKATK MRNIEVVELL 360
  361 LDKGAKVSAV DKKGDTPLHI AIRGRSRKLA ELLLRNPKDG RLLYRPNKAG ETPYNIDCSH 420
  421 QKSILTQIFG ARHLSPTETD GDMLGYDLYS SALADILSEP TMQPPICVGL YAQWGSGKSF 480
  481 LLKKLEDEMK TFAGQQIEPL FQFSWLIVFL TLLLCGGLGL LFAFTVHPNL GIAVSLSFLA 540
  541 LLYIFFIVIY FGGRREGESW NWAWVLSTRL ARHIGYLELL LKLMFVNPPE LPEQTTKALP 600
  601 VRFLFTDYNR LSSVGGETSL AEMIATLSDA CEREFGFLAT RLFRVFKTED TQGKKKWKKT 660
  661 CCLPSFVIFL FIIGCIISGI TLLAIFRVDP KHLTVNAVLI SIASVVGLAF VLNCRTWWQV 720
  721 LDSLLNSQRK RLHNAASKLH KLKSEGFMKV LKCEVELMAR MAKTIDSFTQ NQTRLVVIID 780
  781 GLDACEQDKV LQMLDTVRVL FSKGPFIAIF ASDPHIIIKA INQNLNSVLR DSNINGHDYM 840
  841 RNIVHLPVFL NSRGLSNARK FLVTSATNGD VPCSDTTGIQ EDADRRVSQN SLGEMTKLGS 900
  901 KTALNRRDTY RRRQMQRTIT RQMSFDLTKL LVTEDWFSDI SPQTMRRLLN IVSVTGRLLR 960
  961 ANQISFNWDR LASWINLTEQ WPYRTSWLIL YLEETEGIPD QMTLKTIYER ISKNIPTTKD1020
 1021 VEPLLEIDGD IRNFEVFLSS RTPVLVARDV KVFLPCTVNL DPKLREIIAD VRAAREQISI1080
 1081 GGLAYPPLPL HEGPPRAPSG YSQPPSVCSS TSFNGPFAGG VVSPQPHSSY YSGMTGPQHP1140
 1141 FYNRPFFAPY LYTPRYYPGG SQHLISRPSV KTSLPRDQNN GLEVIKEDAA EGLSSPTDSS1200
 1201 RGSGPAPGPV VLLNSLNVDA VCEKLKQIEG LDQSMLPQYC TTIKKANING RVLAQCNIDE1260
 1261 LKKEMNMNFG DWHLFRSTVL EMRNAESHVV PEDPRFLSES SSGPAPHGEP ARRASHNELP1320
 1321 HTELSSQTPY TLNFSFEELN TLGLDEGAPR HSNLSWQSQT RRTPSLSSLN SQDSSIEISK1380
 1381 LTDKVQAEYR DAYREYIAQM SQLEGGPGST TISGRSSPHS TYYMGQSSSG GSIHSNLEQE1440
 1441 KGKDSEPKPD DGRKSFLMKR GDVIDYSSSG VSTNDASPLD PITEEDEKSD QSGSKLLPGK1500
 1501 KSSERSSLFQ TDLKLKGSGL RYQKLPSDED ESGTEESDNT PLLKDDKDRK AEGKVERVPK1560
 1561 SPEHSAEPIR TFIKAKEYLS DALLDKKDSS DSGVRSSESS PNHSLHNEVA DDSQLEKANL1620
 1621 IELEDDSHSG KRGIPHSLSG LQDPIIARMS ICSEDKKSPS ECSLIASSPE ENWPACQKAY1680
 1681 NLNRTPSTVT LNNNSAPANR ANQNFDEMEG IRETSQVILR PSSSPNPTTI QNENLKSMTH1740
 1741 KRSQRSSYTR LSKDPPELHA AASSESTGFG EERESIL

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