YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114306820
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLIPSRLSY LFLHLFAFCY YAQHVSEQSK VTDRVSRRLI RTYQLYSRTS GKHVQILANK  60
   61 KINAMAEDGD VHAKLIVETD TFGSRVRIKG AETGFYICMN RRGKLIGKKN GLGKDCIFTE 120
  121 IVLENNYTAL QNVKYEGWYM AFTRKGRPRK GSKTRQHQRE VHFMKRLPKG HQIAEHRPFD 180
  181 FINYPFNRRT KRTRYSGER

Type	Start	End	Confidence
Signal Peptide	1	22	0.78
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	199	0.99