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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6331192
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKIEMKVHMH TKFCLICLLT FIFHHCNHCH EEHDHGPEAL HRQHRGMTEL EPSKFSKQAA  60
   61 ENEKKYYIEK LFERYGENGR LSFFGLEKLL TNLGLGERKV VEINHEDLGH DHVSHLDILA 120
  121 VQEGKHFHSH NHQHSHNHLN SENQTVTSVS TKRNHKCDPE KETVEVSVKS DDKHMHDHNH 180
  181 RLRHHHRLHH HLDHNNTHHF HNDSITPSER GEPSNEPSTE TNKTQEQSDV KLPKGKRKKK 240
  241 GRKSNENSEV ITPGFPPNHD QGEQYEHNRV HKPDRVHNPG HSHVHLPERN GHDPGRGHQD 300
  301 LDPDNEGELR HTRKREAPHV KNNAIISLRK DLNEDDHHHE CLNVTQLLKY YGHGANSPIS 360
  361 TDLFTYLCPA LLYQIDSRLC IEHFDKLLVE DINKDKNLVP EDEANIGASA WICGIISITV 420
  421 ISLLSLLGVI LVPIINQGCF KFLLTFLVAL AVGTMSGDAL LHLLPHSQGG HDHSHQHAHG 480
  481 HGHSHGHESN KFLEEYDAVL KGLVALGGIY LLFIIEHCIR MFKHYKQQRG KQKWFMKQNT 540
  541 EESTIGRKLS DHKLNNTPDS DWLQLKPLAG TDDSVVSEDR LNETELTDLE GQQESPPKNY 600
  601 LCIEEEKIID HSHSDGLHTI HEHDLHAAAH NHHGENKTVL RKHNHQWHHK HSHHSHGPCH 660
  661 SGSDLKETGI ANIAWMVIMG DGIHNFSDGL AIGAAFSAGL TGGISTSIAV FCHELPHELG 720
  721 DFAVLLKAGM TVKQAIVYNL LSAMMAYIGM LIGTAVGQYA NNITLWIFAV TAGMFLYVAL 780
  781 VDMLPEMLHG DGDNEEHGFC PVGQFILQNL GLLFGFAIML VIALYEDKIV FDIQF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle