YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114055049
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIDRINYSMY LQEAEKPPTK VDLLAFASFL ETEANQLPDG NLKQAFLMDA QNIRAIHQQH  60
   61 VPPVQQSLNS LKQSVWALKQ TSSKLPEEVK KVLASLDSAQ HFLTSNLSSI VIGETKKFGR 120
  121 TIIGYFEHYL QWVLYAITEK MTSCKPMITA MDSAVNGILC SYVADPLNLF WFGIGKATML 180
  181 LLPAVIIAIK LAKYYRRMDS EDVYDDVGTV PMKNLENGSN GYHKDHLYGV HNPVMTSPSR 240
  241 Y

Type	Start	End	Confidence
Cytoplasmic	1	145	0.52
Transmembrane Helix	146	163	0.42
Non-Cytoplasmic	164	171	0.71
Transmembrane Helix	172	191	0.72
Cytoplasmic	192	241	0.73