YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6594627
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGRQGQATEW RPLRPWNGAM EKLRRVLSGQ DDEEQGLTAQ VLDASSLSFN TRLKWFAICF  60
   61 VCGVFFSILG TGLLWLPGGI KLFAVFYTLG NLAALASTCF LMGPVKQLKK MCEATRLLAT 120
  121 IVMLLCFIFT LCAALWWHKK GLAVLFCILQ FLSMTWYSLS YIPYARDAVI KCCSSLLS

Type	Start	End	Confidence
Cytoplasmic	1	54	0.99
Transmembrane Helix	55	76	0.95
Non-Cytoplasmic	77	82	0.85
Transmembrane Helix	83	105	0.91
Cytoplasmic	106	116	0.84
Transmembrane Helix	117	137	0.94
Non-Cytoplasmic	138	141	0.86
Transmembrane Helix	142	161	0.91
Cytoplasmic	162	178	0.88