YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HIGD2B
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLGFVTPE APFESSKPPI FEGLSPTVYS NPEGFKEKFL RKTRENPVVP IGFLCTAAVL  60
   61 TNGLYCFHQG NSQCSRLMMH TQIAAQGFTI AAILLGLAAT AMKSPP

Type	Start	End	Confidence
Cytoplasmic	1	47	0.94
Transmembrane Helix	48	68	0.87
Non-Cytoplasmic	69	81	0.76
Transmembrane Helix	82	102	0.91
Cytoplasmic	103	106	0.81