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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TNXB
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPAQYALTS SLVLLVLLST ARAGPFSSRS NVTLPAPRPP PQPGGHTVGA GVGSPSSQLY  60
   61 EHTVEGGEKQ VVFTHRINLP PSTGCGCPPG TEPPVLASEV QALRVRLEIL EELVKGLKEQ 120
  121 CTGGCCPASA QAGTGQTDVR TLCSLHGVFD LSRCTCSCEP GWGGPTCSDP TDAEIPPSSP 180
  181 PSASGSCPDD CNDQGRCVRG RCVCFPGYTG PSCGWPSCPG DCQGRGRCVQ GVCVCRAGFS 240
  241 GPDCSQRSCP RGCSQRGRCE GGRCVCDPGY TGDDCGMRSC PRGCSQRGRC ENGRCVCNPG 300
  301 YTGEDCGVRS CPRGCSQRGR CKDGRCVCDP GYTGEDCGTR SCPWDCGEGG RCVDGRCVCW 360
  361 PGYTGEDCST RTCPRDCRGR GRCEDGECIC DTGYSGDDCG VRSCPGDCNQ RGRCEDGRCV 420
  421 CWPGYTGTDC GSRACPRDCR GRGRCENGVC VCNAGYSGED CGVRSCPGDC RGRGRCESGR 480
  481 CMCWPGYTGR DCGTRACPGD CRGRGRCVDG RCVCNPGFTG EDCGSRRCPG DCRGHGLCED 540
  541 GVCVCDAGYS GEDCSTRSCP GGCRGRGQCL DGRCVCEDGY SGEDCGVRQC PNDCSQHGVC 600
  601 QDGVCICWEG YVSEDCSIRT CPSNCHGRGR CEEGRCLCDP GYTGPTCATR MCPADCRGRG 660
  661 RCVQGVCLCH VGYGGEDCGQ EEPPASACPG GCGPRELCRA GQCVCVEGFR GPDCAIQTCP 720
  721 GDCRGRGECH DGSCVCKDGY AGEDCGEARV PSSASAYDQR GLAPGQEYQV TVRALRGTSW 780
  781 GLPASKTITT MIDGPQDLRV VAVTPTTLEL GWLRPQAEVD RFVVSYVSAG NQRVRLEVPP 840
  841 EADGTLLTDL MPGVEYVVTV TAERGRAVSY PASVRANTEE REEESPPRPS LSQPPRRPWG 900
  901 NLTAELSRFR GTVQDLERHL RAHGYPLRAN QTYTSVARHI HEYLQRQVLG SSADGALLVS 960
  961 LDGLRGQFER VVLRWRPQPP AEGPGGELTV PGTTRTVSLP DLRPGTTYHV EVHGVRAGQT1020
 1021 SKSYAFITTT GPSTTQGAQA PLLQQRPQEL GELRVLGRDE TGRLRVVWTA QPDTFAYFQL1080
 1081 RMRVPEGPGA HEEVLPGDVR QALVPPPPPG TPYELSLHGV PPGGKPSDPI IYQGIMDKDE1140
 1141 EKPGKSSGPP RLGELTVTDR TSDSLLLRWT VPEGEFDSFV IQYKDRDGQP QVVPVEGPQR1200
 1201 SAVITSLDPG RKYKFVLYGF VGKKRHGPLV AEAKILPQSD PSPGTPPHLG NLWVTDPTPD1260
 1261 SLHLSWTVPE GQFDTFMVQY RDRDGRPQVV PVEGPERSFV VSSLDPDHKY RFTLFGIANK1320
 1321 KRYGPLTADG TTAPERKEEP PRPEFLEQPL LGELTVTGVT PDSLRLSWTV AQGPFDSFMV1380
 1381 QYKDAQGQPQ AVPVAGDENE VTVPGLDPDR KYKMNLYGLR GRQRVGPESV VAKTAPQEDV1440
 1441 DETPSPTELG TEAPESPEEP LLGELTVTGS SPDSLSLFWT VPQGSFDSFT VQYKDRDGRP1500
 1501 RAVRVGGKES EVTVGGLEPG HKYKMHLYGL HEGQRVGPVS AVGVTAPQQE ETPPATESPL1560
 1561 EPRLGELTVT DVTPNSVGLS WTVPEGQFDS FIVQYKDKDG QPQVVPVAAD QREVTVYNLE1620
 1621 PERKYKMNMY GLHDGQRMGP LSVVIVTAPA TEASKPPLEP RLGELTVTDI TPDSVGLSWT1680
 1681 VPEGEFDSFV VQYKDRDGQP QVVPVAADQR EVTIPDLEPS RKYKFLLFGI QDGKRRSPVS1740
 1741 VEAKTVARGD ASPGAPPRLG ELWVTDPTPD SLRLSWTVPE GQFDSFVVQF KDKDGPQVVP1800
 1801 VEGHERSVTV TPLDAGRKYR FLLYGLLGKK RHGPLTADGT TEARSAMDDT GTKRPPKPRL1860
 1861 GEELQVTTVT QNSVGLSWTV PEGQFDSFVV QYKDRDGQPQ VVPVEGSLRE VSVPGLDPAH1920
 1921 RYKLLLYGLH HGKRVGPISA VAITAGREET ETETTAPTPP APEPHLGELT VEEATSHTLH1980
 1981 LSWMVTEGEF DSFEIQYTDR DGQLQMVRIG GDRNDITLSG LESDHRYLVT LYGFSDGKHV2040
 2041 GPVHVEALTV PEEEKPSEPP TATPEPPIKP RLGELTVTDA TPDSLSLSWT VPEGQFDHFL2100
 2101 VQYRNGDGQP KAVRVPGHEE GVTISGLEPD HKYKMNLYGF HGGQRMGPVS VVGVTEPSME2160
 2161 APEPAEEPLL GELTVTGSSP DSLSLSWTVP QGRFDSFTVQ YKDRDGRPQV VRVGGEESEV2220
 2221 TVGGLEPGRK YKMHLYGLHE GRRVGPVSAV GVTAPEEESP DAPLAKLRLG QMTVRDITSD2280
 2281 SLSLSWTVPE GQFDHFLVQF KNGDGQPKAV RVPGHEDGVT ISGLEPDHKY KMNLYGFHGG2340
 2341 QRVGPVSAVG LTASTEPPTP EPPIKPRLEE LTVTDATPDS LSLSWTVPEG QFDHFLVQYK2400
 2401 NGDGQPKATR VPGHEDRVTI SGLEPDNKYK MNLYGFHGGQ RVGPVSAIGV TEEETPSPTE2460
 2461 PSMEAPEPPE EPLLGELTVT GSSPDSLSLS WTVPQGRFDS FTVQYKDRDG RPQVVRVGGE2520
 2521 ESEVTVGGLE PGRKYKMHLY GLHEGRRVGP VSTVGVTAPQ EDVDETPSPT EPGTEAPEPP2580
 2581 EEPLLGELTV TGSSPDSLSL SWTVPQGRFD SFTVQYKDRD GRPQAVRVGG QESKVTVRGL2640
 2641 EPGRKYKMHL YGLHEGRRLG PVSAVGVTED EAETTQAVPT MTPEPPIKPR LGELTMTDAT2700
 2701 PDSLSLSWTV PEGQFDHFLV QYRNGDGQPK AVRVPGHEDG VTISGLEPDH KYKMNLYGFH2760
 2761 GGQRVGPISV IGVTEEETPS PTELSTEARE PPEEPLLGEL TVTGSSPDSL SLSWTIPQGH2820
 2821 FDSFTVQYKD RDGRPQVMRV RGEESEVTVG GLEPGRKYKM HLYGLHEGRR VGPVSTVGVT2880
 2881 VPTTTPEPPN KPRLGELTVT DATPDSLSLS WMVPEGQFDH FLVQYRNGDG QPKVVRVPGH2940
 2941 EDGVTISGLE PDHKYKMNLY GFHGGQRVGP ISVIGVTEEE TPAPTEPSTE APEPPEEPLL3000
 3001 GELTVTGSSP DSLSLSWTIP QGRFDSFTVQ YKDRDGRPQV VRVRGEESEV TVGGLEPGCK3060
 3061 YKMHLYGLHE GQRVGPVSAV GVTAPKDEAE TTQAVPTMTP EPPIKPRLGE LTVTDATPDS3120
 3121 LSLSWMVPEG QFDHFLVQYR NGDGQPKAVR VPGHEDGVTI SGLEPDHKYK MNLYGFHGGQ3180
 3181 RVGPVSAIGV TEEETPSPTE PSTEAPEAPE EPLLGELTVT GSSPDSLSLS WTVPQGRFDS3240
 3241 FTVQYKDRDG QPQVVRVRGE ESEVTVGGLE PGRKYKMHLY GLHEGQRVGP VSTVGITAPL3300
 3301 PTPLPVEPRL GELAVAAVTS DSVGLSWTVA QGPFDSFLVQ YRDAQGQPQA VPVSGDLRAV3360
 3361 AVSGLDPARK YKFLLFGLQN GKRHGPVPVE ARTAPDTKPS PRLGELTVTD ATPDSVGLSW3420
 3421 TVPEGEFDSF VVQYKDKDGR LQVVPVAANQ REVTVQGLEP SRKYRFLLYG LSGRKRLGPI3480
 3481 SADSTTAPLE KELPPHLGEL TVAEETSSSL RLSWTVAQGP FDSFVVQYRD TDGQPRAVPV3540
 3541 AADQRTVTVE DLEPGKKYKF LLYGLLGGKR LGPVSALGMT APEEDTPAPE LAPEAPEPPE3600
 3601 EPRLGVLTVT DTTPDSMRLS WSVAQGPFDS FVVQYEDTNG QPQALLVDGD QSKILISGLE3660
 3661 PSTPYRFLLY GLHEGKRLGP LSAEGTTGLA PAGQTSEESR PRLSQLSVTD VTTSSLRLNW3720
 3721 EAPPGAFDSF LLRFGVPSPS TLEPHPRPLL QRELMVPGTR HSAVLRDLRS GTLYSLTLYG3780
 3781 LRGPHKADSI QGTARTLSPV LESPRDLQFS EIRETSAKVN WMPPPSRADS FKVSYQLADG3840
 3841 GEPQSVQVDG QARTQKLQGL IPGARYEVTV VSVRGFEESE PLTGFLTTVP DGPTQLRALN3900
 3901 LTEGFAVLHW KPPQNPVDTY DVQVTAPGAP PLQAETPGSA VDYPLHDLVL HTNYTATVRG3960
 3961 LRGPNLTSPA SITFTTGLEA PRDLEAKEVT PRTALLTWTE PPVRPAGYLL SFHTPGGQNQ4020
 4021 EILLPGGITS HQLLGLFPST SYNARLQAMW GQSLLPPVST SFTTGGLRIP FPRDCGEEMQ4080
 4081 NGAGASRTST IFLNGNRERP LNVFCDMETD GGGWLVFQRR MDGQTDFWRD WEDYAHGFGN4140
 4141 ISGEFWLGNE ALHSLTQAGD YSMRVDLRAG DEAVFAQYDS FHVDSAAEYY RLHLEGYHGT4200
 4201 AGDSMSYHSG SVFSARDRDP NSLLISCAVS YRGAWWYRNC HYANLNGLYG STVDHQGVSW4260
 4261 YHWKGFEFSV PFTEMKLRPR NFRSPAGGG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle