YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|123997607, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALWRAYQRA LAAHPWKVQV LTAGSLMGLG DIISQQLVER RGLQEHQRGR TLTMVSLGCG  60
   61 FVGPVVGGWY KVLDRFIPGT TKVDALKKML LDQGGFAPCF LGCFLPLVGA LNGLSAQDNW 120
  121 AKLQRDYPDA LITNYYLWPA VQLANFYLVP LHYRLAVVQC VAVIWNSYLS WKAHRL

Type	Start	End	Confidence
Cytoplasmic	1	15	0.82
Transmembrane Helix	16	34	0.81
Non-Cytoplasmic	35	50	0.74
Transmembrane Helix	51	73	0.89
Cytoplasmic	74	89	0.84
Transmembrane Helix	90	111	0.86
Non-Cytoplasmic	112	149	0.80
Transmembrane Helix	150	169	0.83
Cytoplasmic	170	176	0.84