YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4314286, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLLPLPVP GLLLLEAETH PHFPCNHGQE GACTRHARVR AYPGPLVHRR KRPAWLWELA  60
   61 APACPGAAME RIEGASVGRC AASPYLRPLT LHYRQNGAQK SWDFMKTHDS VTVLLFNSSR 120
  121 RSLVLVKQFR PAVYAGEVER RFPGSLAAVD QDGPRELQPA LPGSAGVTVE LCAGLVDQPG 180
  181 LSLEEVACKE AWEECGYHLA PSDLRRVATY WSGVGLTGSR QTMFYTEVTD AQRSGPGGGL 240
  241 VEEGELIEVV HLPLEGAQAF ADDPDIPKTL GVIFGVSWFL SQVAPNLDLQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.83
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	290	0.99