YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109470017, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKVSCLYV LTVVCWASAL WYLSITRPTS SYTGSKPFSH LTVARKNFTF GNIRTRPINP  60
   61 HSFEFLINEP NKCEKNIPFL VILISTTHKE FDARQAIRET WGDENNFKGI KIATLFLLGK 120
  121 NADPVLNQMV EQESQIFHDI IVEDFIDSYH NLTLKTLMGM RWVATFCSKA KYVMKTDSDI 180
  181 FVNMDNLIYK LLKPSTKPRR RYFTGYVING GPIRDVRSKW YMPRDLYPDS NYPPFCSGTG 240
  241 YIFSADVAEL IYKTSLHTRL LHLEDVYVGL CLRKLGIHPF QNSGFNHWKM AYSLCRYRRV 300
  301 ITVHQISPEE MHRIWNDMSS KKHLRC

Type	Start	End	Confidence
Signal Peptide	1	19	0.91
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	326	0.99