YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20521123
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASAEPPAMPG IVVFRRRWSV GSDDLVLPAI FLFLLHTTWF VILSVVLFGL VYNPHEACSL  60
   61 NLVDHGRGYL GILLSCMIAE MAIIWLSMRG GILYTEPRDS MQYVLYVRLA ILVIEFIYAI 120
  121 VGIVWLTQYY TSCNDLTAKN VTLGMVVCNW VVILSVCITV LCVFDPTGRT FVKLRATKRR 180
  181 QRNLRTYNLR HRLEEGQATS WSRRLKVFLC CTRTKDSQSD AYSEIAYLFA EFFRDLDIVP 240
  241 SDIIAGLVLL RQRQRAKRNA VLDEANNDIL AFLSGMPVTR NTKYLDLKNS QEMLRYKEVC 300
  301 YYMLFALAAY GWPMYLMRKP ACGLCQLARS CSCCLCPARP RFAPGVTIEE DNCCGCNAIA 360
  361 IRRHFLDENM TAVDIVYTSC HDAVYETPFY VAVDHDKKKV VISIRGTLSP KDALTDLTGD 420
  421 AERLPVEGHH GTWLGHKGMV LSAEYIKKKL EQEMVLSQAF GRDLGRGTKH YGLIVVGHSL 480
  481 GAGTAAILSF LLRPQYPTLK CFAYSPPGGL LSEDAMEYSK EFVTAVVLGK DLVPRIGLSQ 540
  541 LEGFRRQLLD VLQRSTKPKW RIIVGATKCI PKSELPEEVE VTTLASTRLW THPSDLTIAL 600
  601 SASTPLYPPG RIIHVVHNHP AEQCCCCEQE EPTYFAIWGD NKAFNEVIIS PAMLHEHLPY 660
  661 VVMEGLNKVL ENYNKGKTAL LSAAKVMVSP TEVDLTPELI FQQQPLPTGP PMPTGLALEL 720
  721 PTADHRNSSV RSKSQSEMSL EGFSEGRLLS PVVAAAARQD PVELLLLSTQ ERLAAELQAR 780
  781 RAPLATMESL SDTESLYSFD SRRSSGFRSI RGSPSLHAVL ERDEGHLFYI DPAIPEENPS 840
  841 LSSRTELLAA DSLSKHSQDT QPLEAALGSG GVTPERPPSA AANDEEEEVG GGGGGPASRG 900
  901 ELALHNGRLG DSPSPQVLEF AEFIDSLFNL DSKSSSFQDL YCMVVPESPT SDYAEGPKSP 960
  961 SQQEILLRAQ FEPNLVPKPP RLFAGSADPS SGISLSPSFP LSSSGELMDL TPTGLSSQEC1020
 1021 LAADKIRTST PTGHGASPAK QDELVISAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle