YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|118341658, gi...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAEGRGTGG STGDADGPGG PGIPDGPGGN AGGPGEAGAT GGRGPRGAGA ARASGPRGGA  60
   61 PRGPHGGAAS AQDGRCPCGA RRPDSRLLEL HITMPFSSPM EAELVRRILS RDAAPLPRPG 120
  121 AVLKDFTVSG NLLFIRLTAA DHRQLQLSIS SCLQQLSLLM WITQCFLPVF LAQAPSGQRR 180
  181

Type	Start	End	Confidence
Non-Cytoplasmic	1	155	0.71
Transmembrane Helix	156	174	0.68
Cytoplasmic	175	180	0.41