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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1177448, gi|5...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLQGLGLQR NPFLQGKRGP GLTSSPPLLP PSLQVNFHSP RSGQRCWAAR TQVEKRLVVL  60
   61 VVLLAAGLVA CLAALGIQYQ TRSPSVCLSE ACVSVTSSIL SSMDPTVDPC HDFFSYACGG 120
  121 WIKANPVPDG HSRWGTFSNL WEHNQAIIKH LLENSTASVS EAERKAQVYY RACMNETRIE 180
  181 ELRAKPLMEL IERLGGWNIT GPWAKDNFQD TLQVVTAHYR TSPFFSVYVS ADSKNSNSNV 240
  241 IQVDQSGLGL PSRDYYLNKT ENEKVLTGYL NYMVQLGKLL GGGDEEAIRP QMQQILDFET 300
  301 ALANITIPQE KRRDEELIYH KVTAAELQTL APAINWLPFL NTIFYPVEIN ESEPIVVYDK 360
  361 EYLEQISTLI NTTDRCLLNN YMIWNLVRKT SSFLDQRFQD ADEKFMEVMY GTKKTCLPRW 420
  421 KFCVSDTENN LGFALGPMFV KATFAEDSKS IATEIILEIK KAFEESLSTL KWMDEETRKS 480
  481 AKEKADAIYN MIGYPNFIMD PKELDKVFND YTAVPDLYFE NAMRFFNFSW RVTADQLRKA 540
  541 PNRDQWSMTP PMVNAYYSPT KNEIVFPAGI LQAPFYTRSS PKALNFGGIG VVVGHELTHA 600
  601 FDDQGREYDK DGNLRPWWKN SSVEAFKRQT ECMVEQYSNY SVNGEPVNGR HTLGENIADN 660
  661 GGLKAAYRAY QNWVKKNGAE HSLPTLGLTN NQLFFLGFAQ VWCSVRTPES SHEGLITDPH 720
  721 SPSRFRVIGS LSNSKEFSEH FRCPPGSPMN PPHKCEVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle