YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CCDS2301.1_1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVGVAHSEV NPNTRVMNSR GMWLTYALGV GLLHIVLLSI PFFSVPVAWT LTNIIHNLGM  60
   61 YVFLHAVKGT PFETPDQGKA RLLTHWEQLD YGVQFTSSRK FFTISPIILY FLASFYTKYD 120
  121 PTHFILNTAS LLSVLIPKMP QLHGVRIFGI NKY

Type	Start	End	Confidence
Cytoplasmic	1	21	0.89
Transmembrane Helix	22	45	0.86
Non-Cytoplasmic	46	100	0.54
Transmembrane Helix	101	117	0.49
Cytoplasmic	118	153	0.48