YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6841264
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPGGAWGLRP RTALAATNME TLYRVPFLVL ECPNLKLKKP PWLHMPSAMT VYALVVVSYF  60
   61 LITGGIIYDV IVEPPSVGSM TDEHGHQRPV AFLAYRVNGQ YIMEGLASSF LFTMGGLGFI 120
  121 ILDRSNAPNI PKLNRFLLLF IGFVCVLLSF FMARVFMRMK LPGYLMG

Type	Start	End	Confidence
Cytoplasmic	1	47	0.94
Transmembrane Helix	48	71	0.87
Non-Cytoplasmic	72	100	0.96
Transmembrane Helix	101	122	0.92
Cytoplasmic	123	135	0.84
Transmembrane Helix	136	157	0.93
Non-Cytoplasmic	158	167	0.96