YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BRI3BP
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGARASGGPL ARAGLLLLLL LLLLLGLLAP GAQGARGRGG AEKNSYRRTV NTFSQSVSSL  60
   61 FGEDNVRAAQ KFLARLTERF VLGVDMFVET LWKVWTELLD VLGLDVSNLS QYFSPASVSS 120
  121 SPARALLLVG VVLLAYWFLS LTLGFTFSVL HVVFGRFFWI VRVVLFSMSC VYILHKYEGE 180
  181 PENAVLPLCF VVAVYFMTGP MGFYWRSSPS GPSNPSNPSV EEKLEHLEKQ VRLLNIRLNR 240
  241 VLESLDRSKD K

Type	Start	End	Confidence
Signal Peptide	1	34	0.99
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	124	0.98
Transmembrane Helix	125	147	0.90
Cytoplasmic	148	157	0.70
Transmembrane Helix	158	175	0.96
Non-Cytoplasmic	176	183	0.82
Transmembrane Helix	184	205	0.94
Cytoplasmic	206	251	0.96