YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31083306
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISWEVVHTV FLFALLYSSL AQDASPQSEI RAEEIPEGAS TLAFVFDVTG SMYDDLVQVI  60
   61 EGASKILETS LKRPKRPLFN FALVPFHDPE IGPVTITTDP KKFQYELREL YVQGGGDCPE 120
  121 MSIGAIKIAL EISLPGSFIY VFTDARSKDY RLTHEVLQLI QQKQSQVVFV LTGDCDDRTH 180
  181 IGYKVYEEIA STSSGQVFHL DKKQVNEVLK WVEEAVQASK VHLLSTDHLE QAVNTWRIPF 240
  241 DPSLKEVTVS LSGPSPMIEI RNPLGKLIKK GFGLHELLNI HNSAKVVNVK EPEAGMWTVK 300
  301 TSSSGRHSVR ITGLSTIDFR AGFSRKPTLD FKKTVSRPVQ GIPTYVLLNT SGISTPARID 360
  361 LLELLSISGS SLKTIPVKYY PHRKPYGIWN ISDFVPPNEA FFLKVTGYDK DDYLFQRVSS 420
  421 VSFSSIVPDA PKVTMPEKTP GYYLQPGQIP CSVDSLLPFT LSFVRNGVTL GVDQYLKESA 480
  481 SVNLDIAKVT LSDEGFYECI AVSSAGTGRA QTFFDVSEPP PVIQVPNNVT VTPGERAVLT 540
  541 CLIISAVDYN LTWQRNDRDV RLAEPARIRT LANLSLELKS VKFNDAGEYH CMVSSEGGSS 600
  601 AASVFLTVQE PPKVTVMPKN QSFTGGSEVS IMCSATGYPK PKIAWTVNDM FIVGSHRYRM 660
  661 TSDGTLFIKN AAPKDAGIYG CLASNSAGTD KQNSTLRYIE APKLMVVQSE LLVALGDITV 720
  721 MECKTSGIPP PQVKWFKGDL ELRPSTFLII DPLLGLLKIQ ETQDLDAGDY TCVAINEAGR 780
  781 ATGKITLDVG SPPVFIQEPA DVSMEIGSNV TLPCYVQGYP EPTIKWRRLD NMPIFSRPFS 840
  841 VSSISQLRTG ALFILNLWAS DKGTYICEAE NQFGKIQSET TVTVTGLVAP LIGISPSVAN 900
  901 VIEGQQLTLP CTLLAGNPIP ERRWIKNSAM LLQNPYITVR SDGSLHIERV QLQDGGEYTC 960
  961 VASNVAGTNN KTTSVVVHVL PTIQHGQQIL STIEGIPVTL PCKASGNPKP SVIWSKKGEL1020
 1021 ISTSSAKFSA GADGSLYVVS PGGEESGEYV CTATNTAGYA KRKVQLTVYV RPRVFGDQRG1080
 1081 LSQDKPVEIS VLAGEEVTLP CEVKSLPPPI ITWAKETQLI SPFSPRHTFL PSGSMKITET1140
 1141 RTSDSGMYLC VATNIAGNVT QAVKLNVHVP PKIQRGPKHL KVQVGQRVDI PCNAQGTPLP1200
 1201 VITWSKGGST MLVDGEHHVS NPDGTLSIDQ ATPSDAGIYT CVATNIAGTD ETEITLHVQE1260
 1261 PPTVEDLEPP YNTTFQERVA NQRIEFPCPA KGTPKPTIKW LHNGRELTGR EPGISILEDG1320
 1321 TLLVIASVTP YDNGEYICVA VNEAGTTERK YNLKVHVPPV IKDKEQVTNV SVLLNQLTNL1380
 1381 FCEVEGTPSP IIMWYKDNVQ VTESSTIQTV NNGKILKLFR ATPEDAGRYS CKAINIAGTS1440
 1441 QKYFNIDVLV PPTIIGTNFP NEVSVVLNRD VALECQVKGT PFPDIHWFKD GKPLFLGDPN1500
 1501 VELLDRGQVL HLKNARRNDK GRYQCTVSNA AGKQAKDIKL TIYIPPSIKG GNVTTDISVL1560
 1561 INSLIKLECE TRGLPMPAIT WYKDGQPIMS SSQALYIDKG QYLHIPRAQV SDSATYTCHV1620
 1621 ANVAGTAEKS FHVDVYVPPM IEGNLATPLN KQVVIAHSLT LECKAAGNPS PILTWLKDGV1680
 1681 PVKANDNIRI EAGGKKLEIM SAQEIDRGQY ICVATSVAGE KEIKYEVDVL VPPAIEGGDE1740
 1741 TSYFIVMVNN LLELDCHVTG SPPPTIMWLK DGQLIDERDG FKILLNGRKL VIAQAQVSNT1800
 1801 GLYRCMAANT AGDHKKEFEV TVHVPPTIKS SGLSERVVVK YKPVALQCIA NGIPNPSITW1860
 1861 LKDDQPVNTA QGNLKIQSSG RVLQIAKTLL EDAGRYTCVA TNAAGETQQH IQLHVHEPPS1920
 1921 LEDAGKMLNE TVLVSNPVQL ECKAAGNPVP VITWYKDNRL LSGSTSMTFL NRGQIIDIES1980
 1981 AQISDAGIYK CVAINSAGAT ELFYSLQVHV APSISGSNNM VAVVVNNPVR LECEARGIPA2040
 2041 PSLTWLKDGS PVSSFSNGLQ VLSGGRILAL TSAQISDTGR YTCVAVNAAG EKQRDIDLRV2100
 2101 YVPPNIMGEE QNVSVLISQA VELLCQSDAI PPPTLTWLKD GHPLLKKPGL SISENRSVLK2160
 2161 IEDAQVQDTG RYTCEATNVA GKTEKKNYNV NIWVPPNIGG SDELTQLTVI EGNLISLLCE2220
 2221 SSGIPPPNLI WKKKGSPVLT DSMGRVRILS GGRQLQISIA EKSDAALYSC VASNVAGTAK2280
 2281 KEYNLQVYIR PTITNSGSHP TEIIVTRGKS ISLECEVQGI PPPTVTWMKD GHPLIKAKGV2340
 2341 EILDEGHILQ LKNIHVSDTG RYVCVAVNVA GMTDKKYDLS VHAPPSIIGN HRSPENISVV2400
 2401 EKNSVSLTCE ASGIPLPSIT WFKDGWPVSL SNSVRILSGG RMLRLMQTTM EDAGQYTCVV2460
 2461 RNAAGEERKI FGLSVLVPPH IVGENTLEDV KVKEKQSVTL TCEVTGNPVP EITWHKDGQP2520
 2521 LQEDEAHHII SGGRFLQITN VQVPHTGRYT CLASSPAGHK SRSFSLNVFV SPTIAGVGSD2580
 2581 GNPEDVTVIL NSPTSLVCEA YSYPPATITW FKDGTPLESN RNIRILPGGR TLQILNAQED2640
 2641 NAGRYSCVAT NEAGEMIKHY EVKVYIPPII NKGDLWGPGL SPKEVKIKVN NTLTLECEAY2700
 2701 AIPSASLSWY KDGQPLKSDD HVNIAANGHT LQIKEAQISD TGRYTCVASN IAGEDELDFD2760
 2761 VNIQVPPSFQ KLWEIGNMLD TGRNGEAKDV IINNPISLYC ETNAAPPPTL TWYKDGHPLT2820
 2821 SSDKVLILPG GRVLQIPRAK VEDAGRYTCV AVNEAGEDSL QYDVRVLVPP IIKGANSDLP2880
 2881 EEVTVLVNKS ALIECLSSGS PAPRNSWQKD GQPLLEDDHH KFLSNGRILQ ILNTQITDIG2940
 2941 RYVCVAENTA GSAKKYFNLN VHVPPSVIGP KSENLTVVVN NFISLTCEVS GFPPPDLSWL3000
 3001 KNEQPIKLNT NTLIVPGGRT LQIIRAKVSD GGEYTCIAIN QAGESKKKFS LTVYVPPSIK3060
 3061 DHDSESLSVV NVREGTSVSL ECESNAVPPP VITWYKNGRM ITESTHVEIL ADGQMLHIKK3120
 3121 AEVSDTGQYV CRAINVAGRD DKNFHLNVYV PPSIEGPERE VIVETISNPV TLTCDATGIP3180
 3181 PPTIAWLKNH KRIENSDSLE VRILSGGSKL QIARSQHSDS GNYTCIASNM EGKAQKYYFL3240
 3241 SIQVPPSVAG AEIPSDVSVL LGENVELVCN ANGIPTPLIQ WLKDGKPIAS GETERIRVSA3300
 3301 NGSTLNIYGA LTSDTGKYTC VATNPAGEED RIFNLNVYVT PTIRGNKDEA EKLMTLVDTS3360
 3361 INIECRATGT PPPQINWLKN GLPLPLSSHI RLLAAGQVIR IVRAQVSDVA VYTCVASNRA3420
 3421 GVDNKHYNLQ VFAPPNMDNS MGTEEITVLK GSSTSMACIT DGTPAPSMAW LRDGQPLGLD3480
 3481 AHLTVSTHGM VLQLLKAETE DSGKYTCIAS NEAGEVSKHF ILKVLEPPHI NGSEEHEEIS3540
 3541 VIVNNPLELT CIASGIPAPK MTWMKDGRPL PQTDQVQTLG GGEVLRISTA QVEDTGRYTC3600
 3601 LASSPAGDDD KEYLVRVHVP PNIAGTDEPR DITVLRNRQV TLECKSDAVP PPVITWLRNG3660
 3661 ERLQATPRVR ILSGGRYLQI NNADLGDTAN YTCVASNIAG KTTREFILTV NVPPNIKGGP3720
 3721 QSLVILLNKS TVLECIAEGV PTPRITWRKD GAVLAGNHAR YSILENGFLH IQSAHVTDTG3780
 3781 RYLCMATNAA GTDRRRIDLQ VHVPPSIAPG PTNMTVIVNV QTTLACEATG IPKPSINWRK3840
 3841 NGHLLNVDQN QNSYRLLSSG SLVIISPSVD DTATYECTVT NGAGDDKRTV DLTVQVPPSI3900
 3901 ADEPTDFLVT KHAPAVITCT ASGVPFPSIH WTKNGIRLLP RGDGYRILSS GAIEILATQL3960
 3961 NHAGRYTCVA RNAAGSAHRH VTLHVHEPPV IQPQPSELHV ILNNPILLPC EATGTPSPFI4020
 4021 TWQKEGINVN TSGRNHAVLP SGGLQISRAV REDAGTYMCV AQNPAGTALG KIKLNVQVPP4080
 4081 VISPHLKEYV IAVDKPITLS CEADGLPPPD ITWHKDGRAI VESIRQRVLS SGSLQIAFVQ4140
 4141 PGDAGHYTCM AANVAGSSST STKLTVHVPP RIRSTEGHYT VNENSQAILP CVADGIPTPA4200
 4201 INWKKDNVLL ANLLGKYTAE PYGELILENV VLEDSGFYTC VANNAAGEDT HTVSLTVHVL4260
 4261 PTFTELPGDV SLNKGEQLRL SCKATGIPLP KLTWTFNNNI IPAHFDSVNG HSELVIERVS4320
 4321 KEDSGTYVCT AENSVGFVKA IGFVYVKEPP VFKGDYPSNW IEPLGGNAIL NCEVKGDPTP4380
 4381 TIQWNRKGVD IEISHRIRQL GNGSLAIYGT VNEDAGDYTC VATNEAGVVE RSMSLTLQSP4440
 4441 PIITLEPVET VINAGGKIIL NCQATGEPQP TITWSRQGHS ISWDDRVNVL SNNSLYIADA4500
 4501 QKEDTSEFEC VARNLMGSVL VRVPVIVQVH GGFSQWSAWR ACSVTCGKGI QKRSRLCNQP4560
 4561 LPANGGKPCQ GSDLEMRNCQ NKPCPVDGSW SEWSLWEECT RSCGRGNQTR TRTCNNPSVQ4620
 4621 HGGRPCEGNA VEIIMCNIRP CPVHGAWSAW QPWGTCSESC GKGTQTRARL CNNPPPAFGG4680
 4681 SYCDGAETQM QVCNERNCPI HGKWATWASW SACSVSCGGG ARQRTRGCSD PVPQYGGRKC4740
 4741 EGSDVQSDFC NSDPCPTHGN WSPWSGWGTC SRTCNGGQMR RYRTCDNPPP SNGGRACGGP4800
 4801 DSQIQRCNTD MCPVDGSWGS WHSWSQCSAS CGGGEKTRKR LCDHPVPVKG GRPCPGDTTQ4860
 4861 VTRCNVQACP GGPQRARGSV IGNINDVEFG IAFLNATITD SPNSDTRIIR AKITNVPRSL4920
 4921 GSAMRKIVSI LNPIYWTTAK EIGEAVNGFT LTNAVFKRET QVEFATGEIL QMSHIARGLD4980
 4981 SDGSLLLDIV VSGYVLQLQS PAEVTVKDYT EDYIQTGPGQ LYAYSTRLFT IDGISIPYTW5040
 5041 NHTVFYDQAQ GRMPFLVETL HASSVESDYN QIEETLGFKI HASISKGDRS NQCPSGFTLD5100
 5101 SVGPFCADED ECAAGNPCSH SCHNAMGTYY CSCPKGLTIA ADGRTCQDID ECALGRHTCH5160
 5161 AGQDCDNTIG SYRCVVRCGS GFRRTSDGLS CQDINECQES SPCHQRCFNA IGSFHCGCEP5220
 5221 GYQLKGRKCM DVNECRQNVC RPDQHCKNTR GGYKCIDLCP NGMTKAENGT CIDIDECKDG5280
 5281 THQCRYNQIC ENTRGSYRCV CPRGYRSQGV GRPCMDINEC EQVPKPCAHQ CSNTPGSFKC5340
 5341 ICPPGQHLLG DGKSCAGLER LPNYGTQYSS YNLARFSPVR NNYQPQQHYR QYSHLYSSYS5400
 5401 EYRNSRTSLS RTRRTIRKTC PEGSEASHDT CVDIDECENT DACQHECKNT FGSYQCICPP5460
 5461 GYQLTHNGKT CQDIDECLEQ NVHCGPNRMC FNMRGSYQCI DTPCPPNYQR DPVSGFCLKN5520
 5521 CPPNDLECAL SPYALEYKLV SLPFGIATNQ DLIRLVAYTQ DGVMHPRTTF LMVDEEQTVP5580
 5581 FALRDENLKG VVYTTRPLRE AETYRMRVRA SSYSANGTIE YQTTFIVYIA VSAYPY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle