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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18044959
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFGLSWVFL VALLRGVQCQ VQLVESGGGV VQPGRSLRLS CAASGFTFSS YGMHWVRQAP  60
   61 GKGLEWVAVI SYDGSNKYYA DSVKGRFTIS RDNSKNTLYL QMNSLRAEDT AVYYCAKDWS 120
  121 EGVETFDIWG QGTMVTVSSG SASAPTLFPL VSCENSPSDT SSVAVGCLAQ DFLPDSITFS 180
  181 WKYKNNSDIS STRGFPSVLR GGKYAATSQV LLPSKDVMQG TDEHVVCKVQ HPNGNKEKNV 240
  241 PLPVIAELPP KVSVFVPPRD GFFGNPRKSK LICQATGFSP RQIQVSWLRE GKQVGSGVTT 300
  301 DQVQAEAKES GPTTYKVTST LTIKESDWLS QSMFTCRVDH RGLTFQQNAS SMCVPDQDTA 360
  361 IRVFAIPPSF ASIFLTKSTK LTCLVTDLTT YDSVTISWTR QNGEAVKTHT NISESHPNAT 420
  421 FSAVGEASIC EDDWNSGERF TCTVTHTDLP SPLKQTISRP KGVALHRPDV YLLPPAREQL 480
  481 NLRESATITC LVTGFSPADV FVQWMQRGQP LSPEKYVTSA PMPEPQAPGR YFAHSILTVS 540
  541 EEEWNTGETY TCVVAHEALP NRVTERTVDK STEGEVSADE EGFENLWATA STFIVLFLLS 600
  601 LFYSTTVTLF KVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle