YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COX6A1
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVVGVSSVS RLLGRSRPQL GRPMSSGAHG EEGSARMWKT LTFFVALPGV AVSMLNVYLK  60
   61 SHHGEHERPE FIAYPHLRIR TKPFPWGDGN HTLFHNPHVN PLPTGYEDE

Type	Start	End	Confidence
Cytoplasmic	1	39	0.46
Transmembrane Helix	40	59	0.75
Non-Cytoplasmic	60	109	0.68