YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|195977122
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFLDNFRW PECECIDWSE RRNAVASVVA GILFFTGWWI MIDAAVVYPK PEQLNHAFHT  60
   61 CGVFSTLAFF MINAVSNAQV RGDSYESGCL GRTGARVWLF IGFMLMFGSL IASMWILFGA 120
  121 YVTQNTDVYP GLAVFFQNAL IFFSTLIYKF GRTEELWT

Type	Start	End	Confidence
Cytoplasmic	1	23	0.96
Transmembrane Helix	24	42	0.92
Non-Cytoplasmic	43	55	0.75
Transmembrane Helix	56	76	0.95
Cytoplasmic	77	96	0.91
Transmembrane Helix	97	119	0.94
Non-Cytoplasmic	120	128	0.84
Transmembrane Helix	129	150	0.89
Cytoplasmic	151	158	0.92