YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14270398
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRPAAPLLHG PVCQRCFGSP PVRPGHAQTL RSSSLSLGMA GQFRSYVWDP LLILSQIVLM  60
   61 QTVYYGSLGL WLALVDGLVR SSPSLDQMFD AEILGFSTPP GRLSMMSFIL NALTCALGLL 120
  121 YFIRRGKQCL DFTVTVHFFH LLGCWFYSSR FPSALTWWLV QAVCIALMAV IGEYLCMRTE 180
  181 LKEIPLNSAP KSNV

Type	Start	End	Confidence
Cytoplasmic	1	50	0.92
Transmembrane Helix	51	74	0.76
Non-Cytoplasmic	75	102	0.91
Transmembrane Helix	103	123	0.94
Cytoplasmic	124	128	0.94
Transmembrane Helix	129	149	0.88
Non-Cytoplasmic	150	156	0.75
Transmembrane Helix	157	177	0.93
Cytoplasmic	178	194	0.97