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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ANTR1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRAGRLGTG LRGLCVAALV LVCAGQGGRR EDGGPACYGG FDLYFILDKS GSVLHHWNEI  60
   61 YYFVEQLAHR FISPQLRMSF IVFSTRGTTL MKLTEDREQI RQGLEELQKV LPGGDTYMHE 120
  121 GFERASEQIY YENSQGYRTA SVIIALTDGE LHEDLFFYSE REANRSRDLG AIVYCVGVKD 180
  181 FNETQLARIA DSKDHVFPVN DGFQALQGII HSILKKSCIE ILAAEPSTIC AGESFQVVVR 240
  241 GNGFRHARNV DRVLCSFKIN DSVTLNEKPF AVEDTYLLCP APILKEVGMK AALQVSMNDG 300
  301 LSFISSSVII TTTHCSDGSI LAIALLILFL LLALALLWWF WPLCCTVIIK EVPPPPVEES 360
  361 EEEDDDGLPK KKWPTVDASY YGGRGVGGIK RMEVRWGEKG STEEGAKLEK AKNARVKMPE 420
  421 QEYEFPEPRN LNNNMRRPSS PRKWYSPIKG KLDALWVLLR KGYDRVSVMR PQPGDTGRCI 480
  481 NFTRVKNSQP AKYPLNNSYH SSSPPPAPIY TPPPPAPHCP PPAPSAPTPP IPSPPSTLPP 540
  541 PPQAPPPNRA PPPSRPPPRP SV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle