YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149018795
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKELHLSLS LVLVFACGLL YQLTLRSQCF FACLPPFTSP QGLEGLLRNG RSIVFIETSE  60
   61 RLEPPPLVSC AVESAAKIYQ EQPILFFMKG LSNATQMTSN TSSYPAFSLL SAINNVFFVP 120
  121 LDMKTLFEDT PLFSWYTKVN SSREKHWLHV SSDASRLAII WKYGGVYMDT DVISIRPIPE 180
  181 ENFLAAQGSQ HSSNGVFGFL PHHPFLWACM ENFVEHYNSG IWGNQGPKLM TRMLKIWCRL 240
  241 KDFQGLGDLK CLNISFLHPQ RFYPIPYPEW RRYYQVWDRD LSFNDSYALH LWNFMNREGK 300
  301 TVVRGSNSLV ENLYQKHCPK TYRVLIQGAE GTVSRKSGKG NR

Type	Start	End	Confidence
Signal Peptide	1	27	0.94
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	342	0.99