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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|120537444, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAGRVRPLR ASDMKKDVRI LLVGEPRVGK TSLIMSLVSE EFPEEVPPRA EEITIPADVT  60
   61 PERVPTHIVD YSEAEQSDEQ LHQEISQANV ICIVYAVNNK HSIDKVTSRW IPLINERTDK 120
  121 DSRLPLILVG NKSDLVEYSS METILPIMNQ YTEIETCVEC SAKNLKNISE LFYYAQKAVL 180
  181 HPTGPLYCPE EKEMKPACIK ALTRIFKISD QDNDGTLNDA ELNFFQRICF NTPLAPQALE 240
  241 DVKNVVRKHL SDGVADSGLT LRGFLFLHTL FIQRGRHETT WTVLRRFGYD DDLDLTPEYL 300
  301 FPLLKIPPDC TTELNHHAYL FLQSTFDKHD LDRDCALSPD ELKDLFQVFP YIPWGPDVNN 360
  361 TVCTNESGWI TYQGFLSQWT LTTYLDVQRC LEYLGYLGYS ILTEQESQAS AITVTRDKKI 420
  421 DLQKKQTQRN VFRCNVIGVK GCGKTGVLQS LLGRNLMRQK KIRDDHKSYY AINTVYVYGQ 480
  481 EKYLLLHDIS ESEFLTEAEI VCDVVCLVYD VTNPKSFEYC ARIFKQHFMD SRIPCLIVAA 540
  541 KSDLHEVKQE HSVSPTDFCR KHKMPPPQAF TCNTADAPSK DIFVKLTTMA MYPHVTQADL 600
  601 KSSTFWLRAS FGATVFAVVG FAMYRALLKQ R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle