YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IPI:IPI00368024....
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELNGVVARL AESSNEDLVD LGKHVFFEVP FDSNMSRTKN RPLVRGQISP LLAVSFATCC  60
   61 AVPGVALLTW GVNPLTGALG VFNIFLYTCC YTPLKRVSIA NTWVGAVVGA IPPVMGWTAA 120
  121 TGSLDAGALL LGGILYSWQF PHFNALSWGL REDYSRGGYC MMSVTHPALC RRVALRHCLA 180
  181 LIALSTTAPV LDITTWVFPV ISLPINLYIS YLGFRFYVDA DRKSSRKLFF CSLWHLPLLL 240
  241 LLMLTCKQRP GQEGDKGEAP S

Type	Start	End	Confidence
Cytoplasmic	1	45	0.97
Transmembrane Helix	46	67	0.91
Non-Cytoplasmic	68	74	0.65
Transmembrane Helix	75	91	0.91
Cytoplasmic	92	98	0.69
Transmembrane Helix	99	120	0.80
Non-Cytoplasmic	121	125	0.63
Transmembrane Helix	126	148	0.74
Cytoplasmic	149	172	0.71
Transmembrane Helix	173	191	0.72
Non-Cytoplasmic	192	195	0.65
Transmembrane Helix	196	218	0.81
Cytoplasmic	219	227	0.83
Transmembrane Helix	228	246	0.71
Non-Cytoplasmic	247	261	0.68