YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41148957
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCRGGRRFAP TKTWRRWHRR VNTTQKRYAI CSALAASALP ALVMSKGHRI EEVPELPLVV  60
   61 EDKVEGYRKT KEAVLLLKKL KARNDIKKVY ASQRMRAGKG KMRNRRRIQR RGPCIIYNED 120
  121 NGIKAFRNIP AITLLNVSKL TISKLAPGGH VGRFCIWTGS AFRKLDELYG TWRKAASLKS 180
  181 NYNLPMHKMI NTDLSRILKS PEIQRAFRAP SKKIHRRVLK KNPLKNLRIM LKLNPYAKTM 240
  241 RRNTILRQAR NHKLRMDKAA AAAAALEAKP DEKAAVAGKK PVVGKKGKKA AVGVKKQKKP 300
  301 LVGKKAAATK KSAPEKKPAE KKPTVEEKKP AALTLKFDYS IKVKSLWTAS FE

Type	Start	End	Confidence
Signal Peptide	1	45	0.99
N-region	1	36
H-region	37	42
C-region	43	45
Cleavage Site	45	46
Non-Cytoplasmic	46	352	0.99