YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149058257
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEMPLSESS PRGTERLRKP WLFCIVALLL MLFCTLGTLI YTSLKPTAKE PCMVKFELLS  60
   61 SKWQMTAPEP HCVNMTSDGM LEILQNGVYL IYGQVIPVDK EYIKDNAPFV VQIVKKNHAL 120
  121 QTLTNDFKIL PIGGIYELNA GDTIYLEFNS EDHIQKSNTY WGIILMPDLS FIS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.94
Transmembrane Helix	21	41	0.97
Non-Cytoplasmic	42	173	0.97